Principal Investigator

Dominique Frueh

Associate Professor

dfrueh1@jhmi.edu
410-614-4719
725 N. Wolfe Street, Hunterian 701

Research Interests

Our laboratory uses nuclear magnetic resonance (NMR) to study modulations of protein dynamics and conformations in active enzymatic systems.

Non-ribosomal peptide synthetases (NRPSs) are large enzymatic systems responsible for the biosynthesis of a wealth of secondary metabolites, many of which are used by pharmaceutical scientists to produce drugs such as antibiotics or anticancer agents. To synthesize all of these remarkably diverse compounds, bacteria and fungi use a surprisingly conserved strategy: NRPSs are organized in modules, made of conserved domains, that each incorporates a dedicated substrate. Thus, new compounds with improved activities can be generated, in principle, by swapping domains or modules in order to control substrate incorporation and hence the final product. To do this efficiently, a deep understanding of domain communication during the synthesis is required. NMR and crystallography studies indicate that domain interactions are transient and that their quaternary structure is likely subject to rearrangements during the synthesis. In addition, both techniques show that individual domains are subject to conformational heterogeneity. We principally use NMR to investigate inter- and intra-domain modifications occurring during the catalytic steps of non-ribosomal peptide synthesis.

Current Members

Neeru Arya

Postdoctoral Fellow

Colin Gardiner

PREP Scholar

Allysa Kemraj

Visiting Student

Shahid Malik

Postdoctoral Fellow

Kenny Marincin

PMB Graduate Student

Alumni

  • Scott Nichols
  • Andrew Goodrich
  • Bradley Harden

Postdoc Alumni

Dr. Subrata H. Mishra

Dr. Subrata H. Mishra

Years: 2010-2016 (Postdoctoral Fellow), 2017-2018 (Senior Research Specialist / NMR Facility Manager)

Legacy: Subrata worked on the biophysics and biochemistry of the cyclization domain of the Yersiniabactin Nonribosomal Peptide Synthetase. He developed new NMR methods for signal assignments and structure determination of large proteins. He trained students and post-docs with patience and passion. Subrata kept working with the Frueh lab after finishing his post-doc stint (2010-16) as NMR facility manager/ Senior Research Specialist and was involved in several collaborations with the Neuroscience and Ophthalmology department. He joined United States Pharmacopeia, MD in 2018 but is still involved in research projects in the Frueh lab, recently publishing his work in Science Advances (July 2022).

Alumni
Dr. Indrani Pal

Dr. Indrani Pal

Alumni
Dr. Aswani K. Kancherla

Dr. Aswani K. Kancherla

Alumni